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Software at the National Facility or another APAC site:
Requests for Software
If you require software that is not currently installed, you can request the National Facility to consider acquiring the software or making it available on the system. Please fill in the software request form. If you require a software package from the list below to ported from one of the systems please email help@nf.nci.org.au.

Software List
Some commercially purchased software is controlled by license keys which limit the number of concurrent users. Our scheduling system recognises a "software" resource flag to prevent jobs starting when the appropriate number of license keys is not available. It is important that all users use the software flag for the package. These flags are provided as part of the documented example in each of the links below.

More information on accounts for the National Facility can be found on the NCI National Facility home page.

Environment Modules
Environment Modules provide a great way to easily customize your shell environment to the requirements of whatever software you wish to use. The module command syntax is the same no matter which command shell you are using. They are available on the ac,xe,lc, and dc.

The alert indicates software that requires some discussion with the facility staff before using. You should read the "How To Use" section of the software for the host for more details.
The hostname suffix tag "-" (eg ac-) means that the software installation is in progress.

Click here to see the list of recently installed software

Computational ChemistryBioinformaticsMath LibrariesStatistics & Mathematics Environments
ABINITaclcBEASTacARPACK and PARPACKacCactuslc
ACES IIacBIOPERLaclcBLACSacMapleaclc
ADFacBIOPYTHONaclcBLASaclcMathematicaaclc
AmberalertaclcBLASTaclcBoostaclcdcMatlablcdcstore
AutoDockalertlcHMMERaclcCPLEXacOctaveaclc
CASTEPalertacmpiBLASTaclcFFTWaclcdcPETScaclc
CCP4lcMrBayesaclcGSLaclcdcRaclcdc
CHARMMalertaclcLAPACKaclcStataalertac
ColumbuslcLIBGOTOalertaclc
CPMDalertacMKLaclcdc
DALTONacNAGalertaclc
deMonalertacScalapackac
DiscoveralertacSCSLac
DMol3alertacTaoac
ESPResSoac
Gamess-PLUSac
Gamess-USaclc
Gaussianalertaclc
GaussViewalertaclc
GROMACSaclc
GULPalertac
LAMMPSac
MCCCS-Towheeac
Migratelc
Molcasac
Moldenaclc
Molproaclc
MOPACalertaclc
MRCCac
NAMDalertac
NW-Chemalertac
Open Babelac
PWscfac
Quantum ESPRESSOac
SAPTaclc
SIESTAalertac
SMXGAUSSac
TURBOMOLEaclc
VASPalertac
VMDaclc
WIEN2kalertac
XPLOR-NIHac
CFD & EngineeringClimate Modelling & Earth SystemsGeophysicsGeospatial tools
ABAQUSalertacCCSM3acescript/FinleyalertacArcInfostore
FluentalertaclcCSIRO Mk3LalertacsnarkacGDALdc-
LS-DynaalertacESCMaclcStGermainacGRASSdc
ferretaclcstoreUnderworldacPROJ.4dcstore
NCARGaclc
NCLac
POMaclc
Astronomy & AstrophysicsPhotonicsParallel Programming Libraries/ToolsCompilers
AIPS++ac-FullWAVEacGlobal Array (GA) Toolsalertac-C and C++aclcdcstore
FITSstore-GNU Pthreadsac-Fortranaclcdcstore
fitsiostoreMCTacHPFlc
ftoolsstoreMPT/MPIaclc
fvstorePVMaclc
IRAFac-lcstore
SAOImage DS9store
STSDASstore
xfitsviewstore
Debuggers & Profilers & SimulatorsCode Development UtilitiesScripting LanguagesEditors
DDDacdcCVSaclcstorejavaacdcEmacsaclcdcstore
Electric FenceaclcFLTKacPerlaclcdcstorenanoac
Intel DebuggeraclcGitacdcPythonaclcdcstoreneditaclc
Intel Trace AnalyzeracsubversionaclcdcstoreRubydcVimaclcstore
Intel Trace CollectoracTcl/Tkaclcdcstore
Jumpshotaclc
Simicslc
Totalviewac
valgrindlcdc
File Formats & Data management packagesData MiningGraphicsNetwork Access and Grid Services
FITSstore-lucenedc-CCP4lcftpstore
HDF4aclcdcstoreferretaclcstoreGlobusaclcdcstore
HDF5aclcdcFreesurferaclcGridFTPaclcdcstore
IRAFac-lcstoreFSLlcMacFUSE sshfsac
mysqlalertdcstoreGMTaclcstorencftpstore
NCOacGNUplotaclcdcstoreOPeNDAPalertdcstore
netCDFaclcdcstoreGraceaclcsftpaclcstore
netpbmacHoudinilcSRBaclcdcstore
postgresalertaclcdcstoreIDLlcsshaclcdcstore
libFAMEacVNCaclc
MESAaclcdcstore
NCARGaclc
NCLac
Ncviewacdc
netpbmac
PDLaclc
PGplotaclcstore
SAOImage DS9store
VMDaclc
 
Partner contact email: help@nf.nci.org.auEmail problems, suggestions, questions to help@nf.nci.org.au